STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1813PFAM: Phytanoyl-CoA dioxygenase; KEGG: sma:SAV7190 hypothetical protein. (393 aa)    
Predicted Functional Partners:
Acel_1814
Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; TrkA-N domain protein; Oxidoreductase, C-terminal domain; KEGG: sco:SCO6984 myo-inositol 2-dehydrogenase.
 
    0.854
Acel_1815
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sma:SAV7189 short chain dehydrogenase.
 
 
 0.848
Acel_1816
2-keto-myo-inositol dehydratase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: gka:GK1890 myo-inositol catabolism protein.
 
   
 0.785
Acel_1800
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.
 
   
 0.527
Acel_1078
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: fra:Francci3_3013 glutamate synthase (ferredoxin).
      
 0.510
Acel_1041
PFAM: Cupin 2, conserved barrel domain protein.
     
 0.495
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.486
Acel_1806
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO6979 probable solute-binding lipoprotein; TC 3.A.1.2.-.
 
     0.435
Acel_0520
CoA-binding domain protein; PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: tfu:Tfu_1311 hypothetical protein.
     
 0.412
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.