node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acel_0820 | Acel_1245 | Acel_0820 | Acel_1245 | PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.509 |
Acel_0820 | polA | Acel_0820 | Acel_1088 | PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.978 |
Acel_0820 | uvrA | Acel_0820 | Acel_1109 | PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.724 |
Acel_0820 | uvrB | Acel_0820 | Acel_1106 | PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.621 |
Acel_0820 | uvrC | Acel_0820 | Acel_1110 | PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.627 |
Acel_0820 | xseA | Acel_0820 | Acel_1875 | PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.640 |
Acel_0820 | xseB | Acel_0820 | Acel_1876 | PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.638 |
Acel_1245 | Acel_0820 | Acel_1245 | Acel_0820 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. | 0.509 |
Acel_1245 | polA | Acel_1245 | Acel_1088 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.494 |
Acel_1245 | uvrA | Acel_1245 | Acel_1109 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.751 |
Acel_1245 | uvrB | Acel_1245 | Acel_1106 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.689 |
Acel_1245 | uvrC | Acel_1245 | Acel_1110 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.548 |
Acel_1245 | xseA | Acel_1245 | Acel_1875 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.596 |
Acel_1877 | xseA | Acel_1877 | Acel_1875 | TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; KEGG: sma:SAV3215 putative glycerol-inducible protein. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.800 |
Acel_1877 | xseB | Acel_1877 | Acel_1876 | TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; KEGG: sma:SAV3215 putative glycerol-inducible protein. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.828 |
folD | polA | Acel_0385 | Acel_1088 | 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.525 |
folD | xseA | Acel_0385 | Acel_1875 | 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.904 |
nusG | xseA | Acel_0294 | Acel_1875 | Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.555 |
polA | Acel_0820 | Acel_1088 | Acel_0820 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. | 0.978 |
polA | Acel_1245 | Acel_1088 | Acel_1245 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.494 |