STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1892KEGG: fra:Francci3_3905 magnesium chelatase, ChlI subunit. (463 aa)    
Predicted Functional Partners:
Acel_1893
PFAM: von Willebrand factor, type A; KEGG: fra:Francci3_3906 von Willebrand factor, type A.
    0.988
Acel_1381
UDP-galactopyranose mutase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.938
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.912
Acel_1894
PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa44520 putative transporter.
       0.773
Acel_1895
KEGG: lxx:Lxx04330 hypothetical protein.
       0.709
Acel_1896
PFAM: protein of unknown function DUF72; KEGG: sco:SCO1727 hypothetical protein.
       0.660
Acel_1891
PFAM: domain of unknown function DUF1745; KEGG: tfu:Tfu_0444 hypothetical protein.
 
     0.607
Acel_1897
Small-conductance mechanosensitive channel-like protein; KEGG: pto:PTO0513 mechanosensitive (MS) ion channel.
       0.491
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
  
 0.475
Acel_1954
PFAM: FAD dependent oxidoreductase; KEGG: sma:SAV1001 dehydrogenase.
 
  
 0.456
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.