STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1895KEGG: lxx:Lxx04330 hypothetical protein. (144 aa)    
Predicted Functional Partners:
Acel_1893
PFAM: von Willebrand factor, type A; KEGG: fra:Francci3_3906 von Willebrand factor, type A.
 
     0.780
Acel_1896
PFAM: protein of unknown function DUF72; KEGG: sco:SCO1727 hypothetical protein.
       0.718
Acel_1892
KEGG: fra:Francci3_3905 magnesium chelatase, ChlI subunit.
       0.709
Acel_1894
PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa44520 putative transporter.
       0.709
Acel_1531
PFAM: amino acid-binding ACT domain protein; KEGG: fra:Francci3_3646 amino acid-binding ACT.
  
     0.682
Acel_0567
Putative phage repressor; PFAM: peptidase S24, S26A and S26B; KEGG: sma:SAV2987 signal peptidase protein.
  
     0.608
Acel_1249
KEGG: sma:SAV6494 hypothetical protein.
  
     0.574
Acel_1409
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sco:SCO6995 protease.
  
     0.553
Acel_1897
Small-conductance mechanosensitive channel-like protein; KEGG: pto:PTO0513 mechanosensitive (MS) ion channel.
       0.531
Acel_1891
PFAM: domain of unknown function DUF1745; KEGG: tfu:Tfu_0444 hypothetical protein.
 
     0.523
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.