STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1896PFAM: protein of unknown function DUF72; KEGG: sco:SCO1727 hypothetical protein. (254 aa)    
Predicted Functional Partners:
Acel_1895
KEGG: lxx:Lxx04330 hypothetical protein.
       0.718
Acel_1893
PFAM: von Willebrand factor, type A; KEGG: fra:Francci3_3906 von Willebrand factor, type A.
       0.662
Acel_1892
KEGG: fra:Francci3_3905 magnesium chelatase, ChlI subunit.
       0.660
Acel_1894
PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa44520 putative transporter.
       0.660
Acel_1897
Small-conductance mechanosensitive channel-like protein; KEGG: pto:PTO0513 mechanosensitive (MS) ion channel.
       0.568
Acel_1670
DNA primase-like protein; KEGG: sth:STH1795 hypothetical protein.
 
    0.510
Acel_1378
KEGG: sma:SAV1696 hypothetical protein.
 
    0.454
Acel_1376
PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sco:SCO6707 putative DNA ligase.
 
    0.450
Acel_1891
PFAM: domain of unknown function DUF1745; KEGG: tfu:Tfu_0444 hypothetical protein.
       0.431
Acel_1437
PFAM: protein of unknown function DUF1130; KEGG: tbd:Tbd_1308 hypothetical protein.
 
     0.419
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.