STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1902PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fra:Francci3_3918 NADH dehydrogenase. (440 aa)    
Predicted Functional Partners:
Acel_1901
Hypothetical protein.
       0.773
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
   0.594
Acel_1020
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: fra:Francci3_4495 peptidase M52, hydrogen uptake protein.
    
   0.594
Acel_1903
PFAM: Uracil-DNA glycosylase superfamily; KEGG: fra:Francci3_3919 uracil-DNA glycosylase superfamily.
       0.557
Acel_0599
TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: mta:Moth_2096 cytochrome d ubiquinol oxidase, subunit II.
 
   
 0.551
Acel_1078
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: fra:Francci3_3013 glutamate synthase (ferredoxin).
      
 0.510
nuoA
NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
  
 0.483
Acel_1152
Enoyl-[acyl-carrier-protein] reductase (NADH); KEGG: tfu:Tfu_1842 putative enoyl-ACP reductase.
      
 0.472
Acel_0029
PFAM: FAD dependent oxidoreductase; KEGG: sco:SCO1661 putative glycerol-3-phosphate dehydrogenase.
   
 
 0.435
Acel_0600
PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: tfu:Tfu_0638 putative cytochrome oxidase subunit I.
 
   
 0.416
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.