STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1902PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fra:Francci3_3918 NADH dehydrogenase. (440 aa)    
Predicted Functional Partners:
Acel_1901
Hypothetical protein.
       0.773
Acel_1152
Enoyl-[acyl-carrier-protein] reductase (NADH); KEGG: tfu:Tfu_1842 putative enoyl-ACP reductase.
      
 0.599
Acel_1903
PFAM: Uracil-DNA glycosylase superfamily; KEGG: fra:Francci3_3919 uracil-DNA glycosylase superfamily.
       0.550
Acel_1020
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: fra:Francci3_4495 peptidase M52, hydrogen uptake protein.
    
 
 0.544
Acel_0962
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sco:SCO2149 Rieske iron-sulfur protein.
   
  
 0.533
nuoA
NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
  
 0.522
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
   0.512
Acel_0599
TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: mta:Moth_2096 cytochrome d ubiquinol oxidase, subunit II.
 
   
 0.508
Acel_0964
PFAM: cytochrome c oxidase, subunit III; KEGG: fra:Francci3_3108 heme/copper-type cytochrome/quinol oxidase subunit 3-like.
  
  
 0.446
Acel_0961
PFAM: Cytochrome b/b6, N-terminal domain; KEGG: tfu:Tfu_1019 ubiquinol-cytochrome c reductase, cytochrome b subunit.
   
  
 0.445
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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