STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1924KEGG: ret:RHE_CH01372 hypothetical protein. (523 aa)    
Predicted Functional Partners:
Acel_0904
KEGG: fra:Francci3_2206 hypothetical protein.
     0.785
Acel_1927
PFAM: O-antigen polymerase; KEGG: fra:Francci3_1569 O-antigen polymerase.
 
     0.779
Acel_1936
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ret:RHE_CH01367 probable UDP-glucose 4-epimerase protein.
  
    0.768
Acel_1937
PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; Oxidoreductase, C-terminal domain; KEGG: ret:RHE_CH01364 probable oxidoreductase protein.
  
     0.751
Acel_1942
PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_1573 glycosyl transferase, family 2.
 
   
 0.733
Acel_1921
KEGG: sma:SAV5969 hypothetical protein.
 
    0.724
Acel_1920
PFAM: glycosyl transferase, group 1; KEGG: fra:Francci3_1562 glycosyl transferase, group 1.
  
     0.679
Acel_1883
PFAM: protein of unknown function DUF255; KEGG: tfu:Tfu_0451 conserved hypothetical protein.
    
   0.604
Acel_1741
FHA domain containing protein; PFAM: Forkhead-associated protein; cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: fra:Francci3_0412 cell divisionFtsK/SpoIIIE.
   
 
 0.580
Acel_1935
KEGG: tte:TTE0666 acetyltransferase (the isoleucine patch superfamily).
  
     0.559
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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