STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1926Hypothetical protein; KEGG: fra:Francci3_1572 parallel beta-helix repeat protein. (266 aa)    
Predicted Functional Partners:
Acel_0614
Glycoside hydrolase, family 5; Has a very high specific activity on carboxymethylcellulose.
    
 
 0.798
Acel_1883
PFAM: protein of unknown function DUF255; KEGG: tfu:Tfu_0451 conserved hypothetical protein.
    
   0.620
Acel_1741
FHA domain containing protein; PFAM: Forkhead-associated protein; cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: fra:Francci3_0412 cell divisionFtsK/SpoIIIE.
  
 
 0.579
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.571
Acel_1501
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: sco:SCO5750 ftsK homolog; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.542
Acel_2141
KEGG: tfu:Tfu_3103 hypothetical protein.
    
 
 0.506
Acel_1927
PFAM: O-antigen polymerase; KEGG: fra:Francci3_1569 O-antigen polymerase.
       0.494
Acel_1928
PFAM: lipopolysaccharide biosynthesis.
       0.484
Acel_1729
C-terminal processing peptidase-3; KEGG: sma:SAV5106 putative carboxy-terminal processing protease precursor; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; Serine peptidase; MEROPS family S41A; Belongs to the peptidase S41A family.
  
   0.469
Acel_1929
PFAM: glycosyl transferase, group 1; KEGG: syd:Syncc9605_0169 glycosyltransferase-like.
  
    0.425
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.