STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1927PFAM: O-antigen polymerase; KEGG: fra:Francci3_1569 O-antigen polymerase. (679 aa)    
Predicted Functional Partners:
Acel_1933
KEGG: ret:RHE_CH01374 hypothetical protein.
 
     0.894
Acel_1937
PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; Oxidoreductase, C-terminal domain; KEGG: ret:RHE_CH01364 probable oxidoreductase protein.
 
     0.875
Acel_1936
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ret:RHE_CH01367 probable UDP-glucose 4-epimerase protein.
 
   
 0.873
Acel_1929
PFAM: glycosyl transferase, group 1; KEGG: syd:Syncc9605_0169 glycosyltransferase-like.
 
  
 0.844
Acel_1928
PFAM: lipopolysaccharide biosynthesis.
       0.802
Acel_1935
KEGG: tte:TTE0666 acetyltransferase (the isoleucine patch superfamily).
 
     0.798
Acel_1932
PFAM: glycosyl transferase, family 2; KEGG: atc:AGR_L_153 hypothetical protein.
 
  
 0.790
Acel_1924
KEGG: ret:RHE_CH01372 hypothetical protein.
 
     0.779
Acel_1942
PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_1573 glycosyl transferase, family 2.
 
   
 0.771
Acel_1921
KEGG: sma:SAV5969 hypothetical protein.
 
     0.760
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.