STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1931PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mba:Mbar_A3370 ABC transporter, ATP-binding protein. (347 aa)    
Predicted Functional Partners:
Acel_1414
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV4061 putative ABC transporter ATP-binding protein.
 
    
0.927
Acel_0909
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: syf:Synpcc7942_1893 ATPase; TC 3.A.1.4.-.
    
0.861
Acel_1930
PFAM: ABC-2 type transporter; KEGG: sso:SSO2646 hypothetical protein.
  
    0.823
Acel_1932
PFAM: glycosyl transferase, family 2; KEGG: atc:AGR_L_153 hypothetical protein.
   
   0.777
Acel_1929
PFAM: glycosyl transferase, group 1; KEGG: syd:Syncc9605_0169 glycosyltransferase-like.
  
    0.773
Acel_0558
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sma:SAV3962 putative ABC transporter ATP-binding protein; TC 3.A.1.1.-.
 
    
0.690
Acel_1933
KEGG: ret:RHE_CH01374 hypothetical protein.
   
   0.680
Acel_1935
KEGG: tte:TTE0666 acetyltransferase (the isoleucine patch superfamily).
       0.670
Acel_1936
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ret:RHE_CH01367 probable UDP-glucose 4-epimerase protein.
  
    0.670
Acel_1934
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gme:Gmet_1325 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
       0.668
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.