STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1942PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_1573 glycosyl transferase, family 2. (287 aa)    
Predicted Functional Partners:
Acel_1912
PFAM: glycosyl transferase, family 2; KEGG: nfa:nfa23840 putative glycosyltransferase.
   
 0.963
Acel_1927
PFAM: O-antigen polymerase; KEGG: fra:Francci3_1569 O-antigen polymerase.
 
  
 0.771
Acel_1253
PFAM: Tetratricopeptide TPR_4; KEGG: tfu:Tfu_2042 hypothetical protein.
  
 
 0.748
Acel_1933
KEGG: ret:RHE_CH01374 hypothetical protein.
 
     0.739
Acel_1940
KEGG: pab:PAB0773 putative acetyltransferase.
     
 0.738
Acel_1924
KEGG: ret:RHE_CH01372 hypothetical protein.
 
   
 0.733
Acel_1941
PFAM: FAD dependent oxidoreductase; KEGG: tfu:Tfu_1660 similar to dehydrogenase.
       0.727
Acel_0904
KEGG: fra:Francci3_2206 hypothetical protein.
 
     0.643
Acel_1937
PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; Oxidoreductase, C-terminal domain; KEGG: ret:RHE_CH01364 probable oxidoreductase protein.
  
     0.633
Acel_1917
PFAM: polysaccharide deacetylase; KEGG: sco:SCO1129 secreted deacetylase.
  
  
 0.631
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.