STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1965KEGG: hch:HCH_05713 hypothetical protein. (600 aa)    
Predicted Functional Partners:
Acel_1966
PFAM: helicase domain protein; KEGG: sth:STH1306 putative DNA helicase.
 
     0.957
pgk
Phosphoglycerate kinase / triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.524
Acel_1967
Hypothetical protein.
       0.468
Acel_1209
PFAM: Allergen V5/Tpx-1 family protein; KEGG: sco:SCO7294 hypothetical protein.
  
     0.451
Acel_1818
MgtE intracellular region; PFAM: CBS domain containing protein; MgtE intracellular region; KEGG: fra:Francci3_3817 MgtE intracellular region.
 
     0.435
Acel_1964
PFAM: PSP1 domain protein; KEGG: fra:Francci3_4308 PSP1.
  
    0.410
Acel_0878
(acyl-carrier-protein) S-malonyltransferase-like protein; KEGG: fra:Francci3_3481 S-malonyltransferase.
  
  
 0.407
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.