STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1979KEGG: sma:SAV4610 hypothetical protein. (86 aa)    
Predicted Functional Partners:
Acel_1978
KEGG: sco:SCO3552 hypothetical protein.
 
    0.805
Acel_1981
KEGG: tfu:Tfu_0127 putative integral membrane protein.
     
 0.723
Acel_1982
PFAM: type II secretion system protein E; KEGG: tfu:Tfu_0128 pilus assembly protein CpaF.
     
 0.648
Acel_1983
KEGG: sco:SCO3557 septum site determining protein.
       0.597
Acel_0467
PFAM: sugar isomerase (SIS); KEGG: fra:Francci3_0753 conserved hypothetical protein.
  
     0.592
Acel_2070
KEGG: cjk:jk0371 hypothetical protein.
  
     0.562
Acel_0370
TIGRFAM: chorismate mutase; KEGG: mbo:Mb0973c hypothetical protein.
  
     0.532
Acel_1980
PFAM: type II secretion system protein; KEGG: tfu:Tfu_0126 putative integral membrane protein.
       0.512
Acel_1977
KEGG: sco:SCO3551 membrane spanning protein.
       0.509
Acel_2024
PFAM: thiamineS protein; KEGG: fra:Francci3_0445 thiamine S.
  
     0.501
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.