STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1982PFAM: type II secretion system protein E; KEGG: tfu:Tfu_0128 pilus assembly protein CpaF. (393 aa)    
Predicted Functional Partners:
Acel_1981
KEGG: tfu:Tfu_0127 putative integral membrane protein.
 
  
 0.936
Acel_0975
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rfr:Rfer_0798 response regulator receiver domain protein.
  
 0.899
Acel_1980
PFAM: type II secretion system protein; KEGG: tfu:Tfu_0126 putative integral membrane protein.
 
  
 0.892
Acel_1737
PFAM: type II secretion system protein; KEGG: fra:Francci3_0781 type II secretion system protein.
 
  
 0.844
Acel_1983
KEGG: sco:SCO3557 septum site determining protein.
      0.832
Acel_1738
PFAM: type II secretion system protein; KEGG: fra:Francci3_0780 type II secretion system protein.
  
 0.738
Acel_1978
KEGG: sco:SCO3552 hypothetical protein.
  
  
 0.677
Acel_1979
KEGG: sma:SAV4610 hypothetical protein.
     
 0.667
Acel_0157
KEGG: tfu:Tfu_0369 hypothetical protein.
  
  
 0.455
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.