STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2001Arsenite efflux ATP-binding protein ArsA; KEGG: tfu:Tfu_0112 putative ion-transporting ATPase; TC 3.A.4.1.1. (346 aa)    
Predicted Functional Partners:
Acel_2002
Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: fra:Francci3_4279 anion-transporting ATPase; TC 3.A.4.1.1.
 
 
 
0.987
Acel_0067
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: fra:Francci3_0460 transcriptional regulator, XRE family.
  
     0.735
Acel_1769
PFAM: ABC-1 domain protein; KEGG: fra:Francci3_3788 ABC-1.
  
     0.681
Acel_0060
PFAM: protein of unknown function DUF1416; KEGG: fra:Francci3_0450 protein of unknown function DUF1416.
  
     0.664
Acel_1998
PFAM: NUDIX hydrolase; KEGG: fra:Francci3_4283 NUDIX hydrolase.
 
    0.635
Acel_1999
PFAM: Endoribonuclease L-PSP; KEGG: tfu:Tfu_0114 hypothetical protein.
       0.630
Acel_2000
KEGG: sma:SAV4587 hypothetical protein.
       0.630
Acel_0226
KEGG: sma:SAV4712 hypothetical protein.
  
     0.514
whiB-3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.495
Acel_0792
KEGG: sma:SAV5589 hypothetical protein.
  
     0.494
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.