STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2001Arsenite efflux ATP-binding protein ArsA; KEGG: tfu:Tfu_0112 putative ion-transporting ATPase; TC 3.A.4.1.1. (346 aa)    
Predicted Functional Partners:
Acel_2002
Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: fra:Francci3_4279 anion-transporting ATPase; TC 3.A.4.1.1.
 
 
 
0.950
Acel_0067
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: fra:Francci3_0460 transcriptional regulator, XRE family.
  
     0.735
pyrF
Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
    
   0.698
Acel_1769
PFAM: ABC-1 domain protein; KEGG: fra:Francci3_3788 ABC-1.
  
     0.681
Acel_0060
PFAM: protein of unknown function DUF1416; KEGG: fra:Francci3_0450 protein of unknown function DUF1416.
  
     0.664
Acel_1999
PFAM: Endoribonuclease L-PSP; KEGG: tfu:Tfu_0114 hypothetical protein.
       0.638
Acel_2000
KEGG: sma:SAV4587 hypothetical protein.
       0.638
Acel_1998
PFAM: NUDIX hydrolase; KEGG: fra:Francci3_4283 NUDIX hydrolase.
 
     0.633
Acel_1689
PFAM: Mov34/MPN/PAD-1 family protein; KEGG: tfu:Tfu_2370 Mov34/MPN/PAD-1.
  
   0.596
Acel_0226
KEGG: sma:SAV4712 hypothetical protein.
  
     0.514
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.