STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2007PFAM: Ferritin, Dps family protein; KEGG: pac:PPA2134 starvation-inducible DNA-binding protein or fine tangled pili major subunit; Belongs to the Dps family. (162 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.864
Acel_1608
PFAM: OsmC family protein; KEGG: sma:SAV1862 putative ATP/GTP-binding protein.
 
  
 0.693
Acel_1761
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: fra:Francci3_0764 sigma 54 modulation protein/ribosomal protein S30EA.
  
    0.583
Acel_2008
Hypothetical protein.
       0.561
Acel_1756
KEGG: fra:Francci3_0769 hypothetical protein.
   
  
 0.502
Acel_1651
PFAM: Heavy metal transport/detoxification protein; KEGG: cef:CE2813 hypothetical protein.
  
  
 0.426
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.