STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2014KEGG: sma:SAV4558 hypothetical protein. (178 aa)    
Predicted Functional Partners:
recR
DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.810
Acel_1419
KEGG: sco:SCO5843 hypothetical protein.
  
     0.742
Acel_0547
KEGG: tfu:Tfu_0551 putative lipoprotein.
  
     0.708
Acel_1166
KEGG: sma:SAV6638 hypothetical protein.
  
     0.681
Acel_1978
KEGG: sco:SCO3552 hypothetical protein.
  
     0.680
Acel_0471
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: sma:SAV3060 hypothetical protein.
  
     0.671
Acel_0743
KEGG: lxx:Lxx07990 membrane protein.
  
     0.665
Acel_0461
KEGG: sma:SAV5044 secreted protein.
  
     0.660
Acel_0750
PFAM: Rod shape-determining protein MreD; KEGG: sco:SCO2609 rod shape-determining protein.
  
     0.653
Acel_1352
KEGG: sma:SAV6829 secreted protein.
  
     0.651
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.