STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2019KEGG: tfu:Tfu_0026 hypothetical protein. (184 aa)    
Predicted Functional Partners:
Acel_1974
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sma:SAV4615 anti-sigma factor.
  
     0.774
Acel_2024
PFAM: thiamineS protein; KEGG: fra:Francci3_0445 thiamine S.
 
     0.754
Acel_1249
KEGG: sma:SAV6494 hypothetical protein.
  
     0.752
Acel_1797
KEGG: sma:SAV3104 hypothetical protein.
  
     0.740
Acel_0666
Hypothetical protein; KEGG: sco:SCO3828 molybdopterin-guanine dinucleotide biosynthesis protein.
  
     0.728
tadA
tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.715
Acel_0981
KEGG: tfu:Tfu_1035 hypothetical protein.
  
     0.663
Acel_2037
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sco:SCO0542 hypothetical regulatory protein.
  
     0.659
Acel_0245
KEGG: sma:SAV5282 hypothetical protein.
  
     0.652
Acel_0565
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sco:SCO5244 anti-sigma factor.
  
     0.652
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.