STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2035PFAM: type IV pilus assembly PilZ. (205 aa)    
Predicted Functional Partners:
Acel_0836
PFAM: flagellar protein FliS; KEGG: lxx:Lxx06280 flagellar-like protein.
  
  
 0.618
Acel_0835
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.603
Acel_0852
PFAM: OmpA/MotB domain protein; KEGG: chy:CHY_0964 flagellar motor protein MotB.
  
 
 0.596
Acel_1873
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG: ade:Adeh_0613 CheA signal transduction histidine kinase.
  
  
 0.585
Acel_0851
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsy:DSY3032 hypothetical protein.
  
   0.583
Acel_2034
Integral membrane protein-like protein; KEGG: fra:Francci3_4524 hypothetical protein.
       0.566
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mta:Moth_0746 flagellar hook-associated protein.
  
  
 0.553
Acel_0854
PFAM: flagellar motor switch protein FliM; KEGG: lic:LIC11836 flagellar switch protein.
  
 
 0.473
Acel_0223
PFAM: MCP methyltransferase, CheR-type; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0615 chemotaxis protein methyltransferase CheR.
  
    0.412
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.