STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2038PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: sma:SAV1721 putative ABC transporter ATP-binding protein. (384 aa)    
Predicted Functional Partners:
Acel_2039
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  0.997
Acel_2040
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: nfa:nfa43280 putative transporter.
  
 0.966
Acel_1282
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0282 polyamine ABC-transporter, inner membrane subunit.
 
 0.897
Acel_1452
PFAM: protein of unknown function DUF214; KEGG: dsy:DSY3655 hypothetical protein.
 
 
    0.881
Acel_1281
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0283 polyamine ABC-transporter, inner membrane subunit.
  
 0.832
Acel_1283
TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 1; KEGG: tfu:Tfu_0281 putative polyamine-binding lipoprotein.
  
 0.782
Acel_2041
TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; TOBE domain protein; KEGG: nfa:nfa43270 putative transporter.
 
   
 0.647
Acel_2036
Hypothetical protein.
       0.556
Acel_2037
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sco:SCO0542 hypothetical regulatory protein.
       0.556
Acel_1118
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1631 ABC transporter, permease protein.
 
    0.542
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.