STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2046Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: tfu:Tfu_2790 regulatory protein, LacI. (344 aa)    
Predicted Functional Partners:
Acel_1078
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: fra:Francci3_3013 glutamate synthase (ferredoxin).
    
 
 0.785
Acel_2049
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: sma:SAV4979 putative sugar transporter solute-binding protein; TC 3.A.1.1.-.
 
     0.540
Acel_2047
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV4981 putative binding protein-dependent transporter; TC 3.A.1.1.-.
       0.507
Acel_2048
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV4980 putative binding protein-dependent transporter; TC 3.A.1.1.-.
       0.507
Acel_2050
PFAM: glycoside hydrolase, family 3 domain protein; KEGG: sco:SCO0293 putative beta-xylosidase; Belongs to the glycosyl hydrolase 3 family.
 
     0.444
Acel_2044
PFAM: NUDIX hydrolase; KEGG: mpa:MAP0346c hypothetical protein.
       0.428
Acel_2045
PFAM: Acetyl xylan esterase; KEGG: sma:SAV1302 putative cephalosporin C deacetylase.
       0.428
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.