STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBTIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: tfu:Tfu_1604 xylulokinase. (479 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; KEGG: sma:SAV7182 putative xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
 
 
 0.997
Acel_0872
L-ribulose 5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: blo:BL0273 L-ribulose-5-phosphate 4-epimerase.
  
 
 0.949
Acel_0722
PFAM: carbohydrate kinase, FGGY; KEGG: gka:GK1941 gluconokinase.
 
  
 
0.941
Acel_1276
PFAM: ribulose-phosphate 3-epimerase; KEGG: tfu:Tfu_1077 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.923
Acel_1127
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.592
Acel_1132
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: sco:SCO6009 solute-binding protein; TC 3.A.1.2.-.
 
   
 0.560
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.541
Acel_0582
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mlr1887 hypothetical protein.
  
 
 0.522
Acel_1816
2-keto-myo-inositol dehydratase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: gka:GK1890 myo-inositol catabolism protein.
  
 
 0.522
Acel_1677
TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; KEGG: sco:SCO3136 galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
  
 0.491
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.