STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2066PFAM: Vitamin K epoxide reductase; KEGG: sai:Saci_1138 conserved crenarchaeal membrane protein. (164 aa)    
Predicted Functional Partners:
Acel_2067
KEGG: sso:SSO1873 hypothetical protein.
       0.802
Acel_1781
Hypothetical protein; KEGG: gsu:GSU1649 cytochrome b/b6.
 
     0.563
Acel_2068
TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; KEGG: tfu:Tfu_2751 excisionase/Xis, DNA-binding.
 
     0.545
Acel_0051
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
  
     0.449
Acel_0050
PFAM: FMN-binding domain protein; KEGG: sma:SAV6771 hypothetical protein.
  
     0.431
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.