STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2087PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fra:Francci3_2478 ABC transporter related. (282 aa)    
Predicted Functional Partners:
Acel_2088
PFAM: ABC-3 protein; KEGG: fra:Francci3_2477 ABC-3.
 
 0.997
Acel_2086
PFAM: periplasmic solute binding protein; KEGG: fra:Francci3_2479 periplasmic solute binding protein.
 
  
 0.996
Acel_2089
PFAM: ABC-3 protein; KEGG: fra:Francci3_2476 ABC-3.
 
 0.996
Acel_2085
Zinc uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sma:SAV5631 putative metal uptake regulation protein; Belongs to the Fur family.
  
  
 0.790
Acel_2090
PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: mta:Moth_1554 type II secretion system protein E.
       0.536
Acel_0596
PFAM: natural resistance-associated macrophage protein; KEGG: mpa:MAP2066 hypothetical protein.
 
  
 0.488
Acel_0402
SMART: Pyrrolo-quinoline quinone; KEGG: spn:SP1772 cell wall surface anchor family protein.
  
     0.471
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.