STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_2136KEGG: fra:Francci3_4527 conserved hypothetical protein. (135 aa)    
Predicted Functional Partners:
Acel_2135
PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: tfu:Tfu_0570 similar to membrane carboxypeptidase (penicillin-binding protein).
     
 0.707
Acel_2134
KEGG: sma:SAV4293 transmembrane protein.
 
     0.647
Acel_1599
KEGG: fra:Francci3_1159 hypothetical protein.
  
     0.636
Acel_1141
KEGG: sco:SCO1839 transcriptional regulator.
  
     0.632
Acel_2137
PFAM: transcriptional regulator PadR family protein; KEGG: sco:SCO3900 hypothetical protein.
       0.629
Acel_0055
KEGG: fra:Francci3_4326 hypothetical protein.
  
     0.598
Acel_2132
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tfu:Tfu_3094 single-strand binding protein.
 
     0.528
Acel_2138
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; KEGG: tfu:Tfu_3099 myo-inositol-1-phosphate synthase.
       0.509
Acel_1531
PFAM: amino acid-binding ACT domain protein; KEGG: fra:Francci3_3646 amino acid-binding ACT.
  
     0.487
Acel_0337
KEGG: fra:Francci3_2435 hypothetical protein.
  
     0.482
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.