Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_2137PFAM: transcriptional regulator PadR family protein; KEGG: sco:SCO3900 hypothetical protein. (199 aa)    
Predicted Functional Partners:
Acel_2138
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; KEGG: tfu:Tfu_3099 myo-inositol-1-phosphate synthase.
     
 0.746
Acel_1610
PFAM: major facilitator superfamily MFS_1; KEGG: tfu:Tfu_3101 hypothetical protein.
 
   
 0.671
Acel_1352
KEGG: sma:SAV6829 secreted protein.
  
     0.666
Acel_2136
KEGG: fra:Francci3_4527 conserved hypothetical protein.
       0.636
Acel_1180
KEGG: sma:SAV6672 putative RecB family exonuclease.
  
     0.598
Acel_2135
PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: tfu:Tfu_0570 similar to membrane carboxypeptidase (penicillin-binding protein).
       0.521
Acel_2134
KEGG: sma:SAV4293 transmembrane protein.
       0.467
Acel_0965
KEGG: tfu:Tfu_1023 putative response regulator.
  
    0.453
Acel_0107
PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO4329 integral membrane protein.
  
     0.450
Acel_1597
Serine phosphatase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: tfu:Tfu_2200 protein phosphatase 2C-like.
  
     0.441
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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