STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Acel_2145KEGG: sco:SCO3893 hypothetical protein. (473 aa)    
Predicted Functional Partners:
murJ
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
 
  
 0.934
Acel_0022
PFAM: protein phosphatase 2C domain protein; KEGG: mpa:MAP0021c Ppp.
 
 
 0.809
Acel_1226
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: fra:Francci3_1468 FHA domain containing protein.
 
 
   0.737
Acel_0024
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: sma:SAV4343 hypothetical protein.
 
 
   0.724
Acel_0931
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: nfa:nfa31920 putative serine/threonine protein kinase.
  
     0.722
Acel_2146
RNA polymerase, sigma subunit, ECF family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO3892 putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
   
 
 0.624
Acel_2147
KEGG: tfu:Tfu_3107 hypothetical protein.
       0.588
Acel_0023
PFAM: Forkhead-associated protein; KEGG: tfu:Tfu_3061 FHA domain protein.
 
 
   0.582
sepF
Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
   
 0.515
Acel_2144
PFAM: NLP/P60 protein; KEGG: lxx:Lxx21540 peptidoglycan lytic protein P45.
 
   
 0.509
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.