node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Csac_0272 | Csac_1258 | Csac_0272 | Csac_1258 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | PFAM: flagellar motor switch protein FliG. | 0.632 |
Csac_0272 | Csac_1317 | Csac_0272 | Csac_1317 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.941 |
Csac_0272 | Csac_2773 | Csac_0272 | Csac_2773 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | PFAM: 60 kDa inner membrane insertion protein. | 0.921 |
Csac_0272 | ffh | Csac_0272 | Csac_2158 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.932 |
Csac_0272 | ftsY | Csac_0272 | Csac_1622 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.935 |
Csac_0272 | rpsP | Csac_0272 | Csac_2157 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.711 |
Csac_0272 | secA | Csac_0272 | Csac_1325 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.937 |
Csac_0272 | secD | Csac_0272 | Csac_1193 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.772 |
Csac_0272 | secE | Csac_0272 | Csac_2209 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.950 |
Csac_0272 | secY | Csac_0272 | Csac_2268 | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.945 |
Csac_1258 | Csac_0272 | Csac_1258 | Csac_0272 | PFAM: flagellar motor switch protein FliG. | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | 0.632 |
Csac_1317 | Csac_0272 | Csac_1317 | Csac_0272 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | 0.941 |
Csac_1317 | Csac_2773 | Csac_1317 | Csac_2773 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | PFAM: 60 kDa inner membrane insertion protein. | 0.980 |
Csac_1317 | ffh | Csac_1317 | Csac_2158 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.980 |
Csac_1317 | ftsY | Csac_1317 | Csac_1622 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.983 |
Csac_1317 | secA | Csac_1317 | Csac_1325 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.991 |
Csac_1317 | secD | Csac_1317 | Csac_1193 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.888 |
Csac_1317 | secE | Csac_1317 | Csac_2209 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.996 |
Csac_1317 | secY | Csac_1317 | Csac_2268 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.991 |
Csac_2773 | Csac_0272 | Csac_2773 | Csac_0272 | PFAM: 60 kDa inner membrane insertion protein. | TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | 0.921 |