STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csac_0486PFAM: protein of unknown function DUF324. (746 aa)    
Predicted Functional Partners:
Csac_0485
Hypothetical protein.
 
 
 0.989
Csac_0489
PFAM: protein of unknown function DUF324.
 
     0.932
Csac_0487
PFAM: protein of unknown function DUF324.
 
  
 0.925
Csac_0078
TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; PFAM: protein of unknown function DUF324.
  
 
 0.872
Csac_0076
TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: protein of unknown function DUF310.
  
 
 0.863
Csac_0079
TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; PFAM: protein of unknown function DUF324.
  
 
 0.846
Csac_0484
Hypothetical protein.
       0.846
Csac_0075
TIGRFAM: CRISPR-associated protein, Csm1 family.
  
 
 0.802
Csac_2593
Hypothetical protein.
  
     0.766
Csac_0488
Hypothetical protein.
       0.751
Your Current Organism:
Caldicellulosiruptor saccharolyticus
NCBI taxonomy Id: 351627
Other names: C. saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus str. DSM 8903, Caldicellulosiruptor saccharolyticus strain DSM 8903
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.