STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csac_0969PFAM: Aldehyde ferredoxin oxidoreductase-like. (586 aa)    
Predicted Functional Partners:
Csac_0968
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
 0.987
Csac_0972
ABC-type tungstate transport system permease component-like protein.
 
   
 0.883
Csac_0971
PFAM: UBA/THIF-type NAD/FAD binding protein.
 
     0.853
Csac_0973
PFAM: binding-protein-dependent transport systems inner membrane component.
 
   
 0.834
Csac_0401
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
   
 
 0.804
Csac_0970
Hypothetical protein.
       0.782
Csac_0545
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 
 0.780
Csac_0579
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 
 0.780
Csac_0976
Molybdenum cofactor synthesis domain containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.778
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
  
 0.725
Your Current Organism:
Caldicellulosiruptor saccharolyticus
NCBI taxonomy Id: 351627
Other names: C. saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus str. DSM 8903, Caldicellulosiruptor saccharolyticus strain DSM 8903
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.