STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csac_1016Hypothetical protein. (375 aa)    
Predicted Functional Partners:
Csac_1017
Hypothetical protein.
 
     0.720
Csac_1018
Beta-galactosidase; PFAM: Glycoside hydrolase, family 42, N-terminal domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase C-terminal domain protein.
 
     0.653
Csac_0598
PFAM: Xylose isomerase domain protein TIM barrel.
  
     0.620
Csac_0600
PFAM: Xylose isomerase domain protein TIM barrel.
  
     0.617
Csac_1155
Esterase/lipase-like protein.
 
  
 0.528
Csac_2695
Uroporphyrinogen-III decarboxylase-like protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.526
Csac_0779
PFAM: lipolytic enzyme, G-D-S-L family.
  
   
 0.481
Csac_0396
PFAM: Xylose isomerase domain protein TIM barrel.
  
     0.462
Csac_1173
PFAM: Xylose isomerase domain protein TIM barrel.
  
     0.461
Csac_2436
PFAM: Acetyl xylan esterase.
  
     0.412
Your Current Organism:
Caldicellulosiruptor saccharolyticus
NCBI taxonomy Id: 351627
Other names: C. saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus str. DSM 8903, Caldicellulosiruptor saccharolyticus strain DSM 8903
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.