STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csac_1663Hypothetical protein. (162 aa)    
Predicted Functional Partners:
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein.
 
 
 0.996
Csac_1662
PFAM: Anti-sigma-28 factor, FlgM family protein.
 
  
 0.994
Csac_1661
Hypothetical protein.
 
  
 0.961
Csac_1665
TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; Belongs to the bacterial flagellin family.
  
 
 0.940
Csac_1666
Hypothetical protein.
 
  
 0.903
Csac_1270
CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein.
 
  
 0.858
Csac_1280
PFAM: type IV pilus assembly PilZ.
 
  
 0.856
Csac_1700
PFAM: flagellar protein FliS.
  
  
 0.853
Csac_1269
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM.
 
  
 0.822
Csac_1254
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.809
Your Current Organism:
Caldicellulosiruptor saccharolyticus
NCBI taxonomy Id: 351627
Other names: C. saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus str. DSM 8903, Caldicellulosiruptor saccharolyticus strain DSM 8903
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