STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csac_2533Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region. (617 aa)    
Predicted Functional Partners:
Csac_2532
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
 
 
 0.975
Csac_0301
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
  
 
 0.915
Csac_1356
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
 
 
 0.911
Csac_2690
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
 
 
 0.904
Csac_0124
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
 
 
 0.901
Csac_0684
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
 
 
 0.891
Csac_2550
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
  
 
 0.888
Csac_2545
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
 
 
 0.884
Csac_2518
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
  
  
 0.731
Csac_2509
PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver.
  
  
 0.626
Your Current Organism:
Caldicellulosiruptor saccharolyticus
NCBI taxonomy Id: 351627
Other names: C. saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus str. DSM 8903, Caldicellulosiruptor saccharolyticus strain DSM 8903
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