Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Csac_2727 | Csac_2728 | PFAM: helix-turn-helix- domain containing protein, AraC type; histidine kinase, HAMP region domain protein. | Hypothetical protein. | 0.482 |
Csac_2727 | Csac_2729 | PFAM: helix-turn-helix- domain containing protein, AraC type; histidine kinase, HAMP region domain protein. | PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | 0.460 |
Csac_2727 | Csac_2730 | PFAM: helix-turn-helix- domain containing protein, AraC type; histidine kinase, HAMP region domain protein. | PFAM: glycosyl hydrolase, family 88. | 0.449 |
Csac_2728 | Csac_2727 | Hypothetical protein. | PFAM: helix-turn-helix- domain containing protein, AraC type; histidine kinase, HAMP region domain protein. | 0.482 |
Csac_2728 | Csac_2729 | Hypothetical protein. | PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | 0.732 |
Csac_2728 | Csac_2730 | Hypothetical protein. | PFAM: glycosyl hydrolase, family 88. | 0.723 |
Csac_2729 | Csac_2727 | PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | PFAM: helix-turn-helix- domain containing protein, AraC type; histidine kinase, HAMP region domain protein. | 0.460 |
Csac_2729 | Csac_2728 | PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | Hypothetical protein. | 0.732 |
Csac_2729 | Csac_2730 | PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | PFAM: glycosyl hydrolase, family 88. | 0.741 |
Csac_2730 | Csac_2727 | PFAM: glycosyl hydrolase, family 88. | PFAM: helix-turn-helix- domain containing protein, AraC type; histidine kinase, HAMP region domain protein. | 0.449 |
Csac_2730 | Csac_2728 | PFAM: glycosyl hydrolase, family 88. | Hypothetical protein. | 0.723 |
Csac_2730 | Csac_2729 | PFAM: glycosyl hydrolase, family 88. | PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | 0.741 |