STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA18495.1Transcriptional regulator ExsA. (315 aa)    
Predicted Functional Partners:
OTA17385.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.832
OTA17971.1
Prephenate dehydratase.
  
 
 0.814
OTA18500.1
5-carboxymethyl-2-hydroxymuconate isomerase.
 
    0.799
OTA18501.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.787
OTA17535.1
Glutamate synthase large chain.
    
  0.770
OTA18498.1
2-oxo-hepta-3-ene-1,7-dioic acid hydratase.
 
 
  0.755
OTA16072.1
Malic enzyme.
    
 0.745
OTA18494.1
Paerucumarin biosynthesis protein PvcC.
 
  
  0.734
OTA18496.1
Permease.
 
  
 0.725
OTA18505.1
Transcriptional regulator SlyA.
 
  
 0.713
Your Current Organism:
Xenorhabdus vietnamensis
NCBI taxonomy Id: 351656
Other names: CIP 109945, DSM 22392, X. vietnamensis, Xenorhabdus sp. VN01, Xenorhabdus vietnamensis Tailliez et al. 2010, strain VN01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.