Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OTA15059.1 | OTA17535.1 | Xvie_03149 | Xvie_00921 | NADH oxidase. | Glutamate synthase large chain. | 0.873 |
OTA15059.1 | OTA18039.1 | Xvie_03149 | Xvie_00723 | NADH oxidase. | NifS protein. | 0.640 |
OTA15059.1 | bfd | Xvie_03149 | Xvie_00407 | NADH oxidase. | Bacterioferritin-associated ferredoxin. | 0.676 |
OTA15059.1 | cysI | Xvie_03149 | Xvie_01262 | NADH oxidase. | Sulfite reductase; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.625 |
OTA15059.1 | iscS | Xvie_03149 | Xvie_03677 | NADH oxidase. | NifS protein; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.640 |
OTA15059.1 | nfuA | Xvie_03149 | Xvie_02246 | NADH oxidase. | Fe-S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.682 |
OTA15059.1 | nirD_1 | Xvie_03149 | Xvie_01668 | NADH oxidase. | Nitrite reductase small subunit. | 0.982 |
OTA15059.1 | nirD_2 | Xvie_03149 | Xvie_03150 | NADH oxidase. | Nitrite reductase small subunit. | 0.995 |
OTA16586.1 | OTA17535.1 | Xvie_01669 | Xvie_00921 | NADH oxidase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Glutamate synthase large chain. | 0.873 |
OTA16586.1 | OTA18039.1 | Xvie_01669 | Xvie_00723 | NADH oxidase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | NifS protein. | 0.640 |
OTA16586.1 | bfd | Xvie_01669 | Xvie_00407 | NADH oxidase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Bacterioferritin-associated ferredoxin. | 0.676 |
OTA16586.1 | cysI | Xvie_01669 | Xvie_01262 | NADH oxidase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Sulfite reductase; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.625 |
OTA16586.1 | iscS | Xvie_01669 | Xvie_03677 | NADH oxidase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | NifS protein; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.640 |
OTA16586.1 | nfuA | Xvie_01669 | Xvie_02246 | NADH oxidase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Fe-S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.682 |
OTA16586.1 | nirD_1 | Xvie_01669 | Xvie_01668 | NADH oxidase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Nitrite reductase small subunit. | 0.995 |
OTA16586.1 | nirD_2 | Xvie_01669 | Xvie_03150 | NADH oxidase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Nitrite reductase small subunit. | 0.982 |
OTA17535.1 | OTA15059.1 | Xvie_00921 | Xvie_03149 | Glutamate synthase large chain. | NADH oxidase. | 0.873 |
OTA17535.1 | OTA16586.1 | Xvie_00921 | Xvie_01669 | Glutamate synthase large chain. | NADH oxidase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.873 |
OTA17535.1 | bfd | Xvie_00921 | Xvie_00407 | Glutamate synthase large chain. | Bacterioferritin-associated ferredoxin. | 0.791 |
OTA17535.1 | cysI | Xvie_00921 | Xvie_01262 | Glutamate synthase large chain. | Sulfite reductase; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.832 |
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