STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glk_1Glucokinase; Belongs to the bacterial glucokinase family. (322 aa)    
Predicted Functional Partners:
OTA15662.1
DNA-binding transcriptional regulator.
  
 0.872
OTA18287.1
PTS system, beta-glucoside-specific IIABC component.
    
 0.844
OTA18111.1
Bifunctional maltose and glucose-specific PTS system components IICB.
    
 0.844
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.830
OTA15953.1
PTS system, beta-glucoside-specific IIABC component.
    
 0.823
OTA15457.1
PTS system, beta-glucoside-specific IIABC component.
    
 0.823
malQ
4-alpha-glucanotransferase.
 
  
 0.693
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
 0.670
glmM
Phosphoglucomutase/phosphomannomutase family protein MrsA; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
     
 0.655
OTA16510.1
Phosphoglucomutase.
     
 0.643
Your Current Organism:
Xenorhabdus vietnamensis
NCBI taxonomy Id: 351656
Other names: CIP 109945, DSM 22392, X. vietnamensis, Xenorhabdus sp. VN01, Xenorhabdus vietnamensis Tailliez et al. 2010, strain VN01
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