STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA15785.1PTS system transporter subunit IIC. (265 aa)    
Predicted Functional Partners:
OTA15784.1
PTS system transporter subunit IID.
 0.999
OTA15786.1
N-acetylgalactosamine-specific enzyme IIB component of PTS.
 
 0.999
OTA18287.1
PTS system, beta-glucoside-specific IIABC component.
  
 
 0.892
OTA18321.1
Transcriptional regulator.
 
 
 0.834
OTA16866.1
PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB.
  
  
  0.831
OTA18320.1
PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB.
  
  
  0.820
OTA16865.1
PTS system cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.819
OTA18111.1
Bifunctional maltose and glucose-specific PTS system components IICB.
   
 
 0.817
OTA18319.1
PTS system cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.803
OTA15944.1
Transcriptional regulator.
  
  
 0.770
Your Current Organism:
Xenorhabdus vietnamensis
NCBI taxonomy Id: 351656
Other names: CIP 109945, DSM 22392, X. vietnamensis, Xenorhabdus sp. VN01, Xenorhabdus vietnamensis Tailliez et al. 2010, strain VN01
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