STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA15545.1Hypothetical protein. (450 aa)    
Predicted Functional Partners:
OTA15552.1
Hypothetical protein.
 
 
 0.995
OTA15551.1
Hypothetical protein.
 
 
 0.988
OTA15548.1
Hypothetical protein.
 
 
 0.987
OTA15539.1
Hypothetical protein.
 
 
 0.986
OTA15544.1
Hypothetical protein.
 
  
 0.980
OTA15549.1
Hypothetical protein.
 
 
 0.980
OTA15546.1
Hypothetical protein.
 
  
 0.970
OTA15550.1
Hypothetical protein.
 
  
 0.966
OTA15540.1
Hypothetical protein.
 
 
 0.961
OTA15547.1
Hypothetical protein.
 
  
 0.958
Your Current Organism:
Xenorhabdus vietnamensis
NCBI taxonomy Id: 351656
Other names: CIP 109945, DSM 22392, X. vietnamensis, Xenorhabdus sp. VN01, Xenorhabdus vietnamensis Tailliez et al. 2010, strain VN01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.