STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA14929.1DNA primase. (297 aa)    
Predicted Functional Partners:
OTA17476.1
Terminase.
 
     0.758
OTA17471.1
Peptidase.
 
     0.614
OTA14286.1
DNA primase.
     0.605
OTA17470.1
Capsid protein.
 
     0.575
OTA14941.1
Putative P4-specific DNA primase.
     0.537
OTA17473.1
Head-tail adaptor.
 
     0.496
OTA17477.1
Terminase.
 
     0.484
OTA17472.1
Phage portal protein.
 
     0.473
OTA16267.1
Hypothetical protein.
  
     0.469
OTA15230.1
Anti-repressor protein.
  
     0.467
Your Current Organism:
Xenorhabdus vietnamensis
NCBI taxonomy Id: 351656
Other names: CIP 109945, DSM 22392, X. vietnamensis, Xenorhabdus sp. VN01, Xenorhabdus vietnamensis Tailliez et al. 2010, strain VN01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.