STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA14363.1FMN reductase. (229 aa)    
Predicted Functional Partners:
OTA15127.1
Oxidoreductase.
  
 
 0.721
OTA16432.1
Non-heme iron-binding ferritin; Belongs to the Dps family.
  
  
 0.679
OTA16803.1
Type IV pilus biosynthesis protein PilL.
   
    0.667
OTA16110.1
Fructose-bisphosphate aldolase.
   
    0.665
OTA14360.1
Coenzyme F390 synthetase.
 
     0.651
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
    
  0.645
kefG
Glutathione-regulated potassium-efflux system ancillary protein KefG; Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB.
    
 0.639
rbn
Ribonuclease BN.
 
     0.622
OTA16270.1
NADPH quinone reductase MdaB.
    
 0.618
OTA18519.1
Hypothetical protein.
   
  
 0.612
Your Current Organism:
Xenorhabdus vietnamensis
NCBI taxonomy Id: 351656
Other names: CIP 109945, DSM 22392, X. vietnamensis, Xenorhabdus sp. VN01, Xenorhabdus vietnamensis Tailliez et al. 2010, strain VN01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.