STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU28392.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
SFU61309.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
    
 
 0.888
SFU91421.1
ATPase family associated with various cellular activities (AAA).
    
 
 0.888
SFU44264.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.791
SFU64057.1
[molybdopterin synthase] sulfurylase.
    
 0.571
SFU77319.1
[sulfur carrier protein ThiS] adenylyltransferase.
    
 0.571
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
     
 0.556
SFU31420.1
Taurine catabolism dioxygenase TauD, TfdA family.
  
     0.547
SFU65754.1
Hypothetical protein.
  
     0.534
SFU36959.1
Hemoglobin.
  
     0.474
SFU28405.1
Surfactin synthase thioesterase subunit.
       0.458
Your Current Organism:
Xenorhabdus koppenhoeferi
NCBI taxonomy Id: 351659
Other names: CIP 109199, DSM 18168, X. koppenhoeferi, Xenorhabdus koppenhoeferi Tailliez et al. 2006, Xenorhabdus sp. USNJ01, strain USNJ01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.