Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU28667.1 | SFU28682.1 | SAMN05421784_10260 | SAMN05421784_10261 | Chemotaxis protein MotA. | Chemotaxis protein MotB. | 0.999 |
SFU28667.1 | SFU28701.1 | SAMN05421784_10260 | SAMN05421784_10262 | Chemotaxis protein MotA. | CheA signal transduction histidine kinase. | 0.983 |
SFU28667.1 | SFU28718.1 | SAMN05421784_10260 | SAMN05421784_10263 | Chemotaxis protein MotA. | Purine-binding chemotaxis protein CheW. | 0.944 |
SFU28667.1 | SFU28823.1 | SAMN05421784_10260 | SAMN05421784_10269 | Chemotaxis protein MotA. | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.827 |
SFU28667.1 | SFU29099.1 | SAMN05421784_10260 | SAMN05421784_10286 | Chemotaxis protein MotA. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.981 |
SFU28667.1 | SFU29117.1 | SAMN05421784_10260 | SAMN05421784_10287 | Chemotaxis protein MotA. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.952 |
SFU28667.1 | SFU29699.1 | SAMN05421784_10260 | SAMN05421784_102117 | Chemotaxis protein MotA. | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.908 |
SFU28667.1 | SFU29835.1 | SAMN05421784_10260 | SAMN05421784_102123 | Chemotaxis protein MotA. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.981 |
SFU28667.1 | SFU92713.1 | SAMN05421784_10260 | SAMN05421784_14718 | Chemotaxis protein MotA. | Flagellar protein FliS. | 0.962 |
SFU28667.1 | flgK | SAMN05421784_10260 | SAMN05421784_10294 | Chemotaxis protein MotA. | Flagellar hook-associated protein 1 FlgK. | 0.979 |
SFU28682.1 | SFU28667.1 | SAMN05421784_10261 | SAMN05421784_10260 | Chemotaxis protein MotB. | Chemotaxis protein MotA. | 0.999 |
SFU28682.1 | SFU28701.1 | SAMN05421784_10261 | SAMN05421784_10262 | Chemotaxis protein MotB. | CheA signal transduction histidine kinase. | 0.988 |
SFU28682.1 | SFU28718.1 | SAMN05421784_10261 | SAMN05421784_10263 | Chemotaxis protein MotB. | Purine-binding chemotaxis protein CheW. | 0.974 |
SFU28682.1 | SFU28823.1 | SAMN05421784_10261 | SAMN05421784_10269 | Chemotaxis protein MotB. | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.927 |
SFU28682.1 | SFU29099.1 | SAMN05421784_10261 | SAMN05421784_10286 | Chemotaxis protein MotB. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.946 |
SFU28682.1 | SFU29117.1 | SAMN05421784_10261 | SAMN05421784_10287 | Chemotaxis protein MotB. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.931 |
SFU28682.1 | SFU29699.1 | SAMN05421784_10261 | SAMN05421784_102117 | Chemotaxis protein MotB. | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.932 |
SFU28682.1 | SFU29835.1 | SAMN05421784_10261 | SAMN05421784_102123 | Chemotaxis protein MotB. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.928 |
SFU28682.1 | SFU92713.1 | SAMN05421784_10261 | SAMN05421784_14718 | Chemotaxis protein MotB. | Flagellar protein FliS. | 0.922 |
SFU28682.1 | flgK | SAMN05421784_10261 | SAMN05421784_10294 | Chemotaxis protein MotB. | Flagellar hook-associated protein 1 FlgK. | 0.966 |
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