Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFU31460.1 | epmA | SAMN05421784_10317 | SAMN05421784_10511 | Lysine 2,3-aminomutase. | lysyl-tRNA synthetase, class 2; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.719 |
| SFU38258.1 | SFU38279.1 | SAMN05421784_1059 | SAMN05421784_10510 | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Succinate dehydrogenase subunit A. | 0.998 |
| SFU38258.1 | epmA | SAMN05421784_1059 | SAMN05421784_10511 | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | lysyl-tRNA synthetase, class 2; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.417 |
| SFU38258.1 | frdC | SAMN05421784_1059 | SAMN05421784_1058 | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Fumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. | 0.999 |
| SFU38258.1 | frdD | SAMN05421784_1059 | SAMN05421784_1057 | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Succinate dehydrogenase subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. | 0.999 |
| SFU38279.1 | SFU38258.1 | SAMN05421784_10510 | SAMN05421784_1059 | Succinate dehydrogenase subunit A. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.998 |
| SFU38279.1 | epmA | SAMN05421784_10510 | SAMN05421784_10511 | Succinate dehydrogenase subunit A. | lysyl-tRNA synthetase, class 2; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.416 |
| SFU38279.1 | frdC | SAMN05421784_10510 | SAMN05421784_1058 | Succinate dehydrogenase subunit A. | Fumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. | 0.996 |
| SFU38279.1 | frdD | SAMN05421784_10510 | SAMN05421784_1057 | Succinate dehydrogenase subunit A. | Succinate dehydrogenase subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. | 0.993 |
| SFU41289.1 | SFU41306.1 | SAMN05421784_1069 | SAMN05421784_10610 | Elongation factor P. | Elongation factor P. | 0.812 |
| SFU41289.1 | epmA | SAMN05421784_1069 | SAMN05421784_10511 | Elongation factor P. | lysyl-tRNA synthetase, class 2; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.794 |
| SFU41306.1 | SFU41289.1 | SAMN05421784_10610 | SAMN05421784_1069 | Elongation factor P. | Elongation factor P. | 0.812 |
| SFU41306.1 | epmA | SAMN05421784_10610 | SAMN05421784_10511 | Elongation factor P. | lysyl-tRNA synthetase, class 2; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.871 |
| SFU53205.1 | SFU69675.1 | SAMN05421784_11061 | SAMN05421784_11934 | Hypothetical protein. | L-lysine 2,3-aminomutase. | 0.553 |
| SFU53205.1 | efp | SAMN05421784_11061 | SAMN05421784_11935 | Hypothetical protein. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.474 |
| SFU53205.1 | epmA | SAMN05421784_11061 | SAMN05421784_10511 | Hypothetical protein. | lysyl-tRNA synthetase, class 2; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.428 |
| SFU69675.1 | SFU53205.1 | SAMN05421784_11934 | SAMN05421784_11061 | L-lysine 2,3-aminomutase. | Hypothetical protein. | 0.553 |
| SFU69675.1 | efp | SAMN05421784_11934 | SAMN05421784_11935 | L-lysine 2,3-aminomutase. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.831 |
| SFU69675.1 | epmA | SAMN05421784_11934 | SAMN05421784_10511 | L-lysine 2,3-aminomutase. | lysyl-tRNA synthetase, class 2; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.796 |
| efp | SFU53205.1 | SAMN05421784_11935 | SAMN05421784_11061 | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Hypothetical protein. | 0.474 |
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