STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU44505.1Citrate lyase beta subunit. (305 aa)    
Predicted Functional Partners:
SFU44523.1
PELOTA RNA binding domain-containing protein.
 
   
 0.959
SFU44542.1
TRSP domain C terminus to PRTase_2.
 
   
 0.918
SFU82028.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 
 0.860
SFU44564.1
Tellurium resistance protein TerZ.
 
     0.855
SFU44581.1
Tellurite resistance protein TerB.
 
     0.841
SFU44618.1
Tellurium resistance protein TerD.
 
     0.830
SFU46694.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.826
SFU52930.1
Short chain enoyl-CoA hydratase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
     
 0.784
SFU94749.1
Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
     
 0.784
SFU42523.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.710
Your Current Organism:
Xenorhabdus koppenhoeferi
NCBI taxonomy Id: 351659
Other names: CIP 109199, DSM 18168, X. koppenhoeferi, Xenorhabdus koppenhoeferi Tailliez et al. 2006, Xenorhabdus sp. USNJ01, strain USNJ01
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