STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU48550.1Outer membrane receptor for ferrienterochelin and colicins. (658 aa)    
Predicted Functional Partners:
SFU84766.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.922
SFU90285.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.858
SFU98345.1
Protein TonB.
  
 
 0.828
SFU48574.1
Iron complex transport system ATP-binding protein.
  
  
 0.771
SFU58501.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
  
 0.685
SFU90267.1
Hemoglobin/transferrin/lactoferrin receptor protein.
  
 
 0.651
SFU58226.1
Pesticin/yersiniabactin receptor.
  
 
0.647
SFU87389.1
Autotransporter beta-domain-containing protein.
  
 
 0.618
SFU59792.1
Ig-like domain (group 1).
    
 
 0.614
SFU75984.1
Adhesin/invasin.
    
 
 0.614
Your Current Organism:
Xenorhabdus koppenhoeferi
NCBI taxonomy Id: 351659
Other names: CIP 109199, DSM 18168, X. koppenhoeferi, Xenorhabdus koppenhoeferi Tailliez et al. 2006, Xenorhabdus sp. USNJ01, strain USNJ01
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