Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU41386.1 | SFU50031.1 | SAMN05421784_10614 | SAMN05421784_10929 | YejG-like protein. | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | 0.674 |
SFU41386.1 | SFU60471.1 | SAMN05421784_10614 | SAMN05421784_11454 | YejG-like protein. | HAMP domain-containing protein. | 0.773 |
SFU41386.1 | SFU86743.1 | SAMN05421784_10614 | SAMN05421784_13611 | YejG-like protein. | Protein CpxP. | 0.761 |
SFU41386.1 | wecD | SAMN05421784_10614 | SAMN05421784_10926 | YejG-like protein. | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family. | 0.561 |
SFU41386.1 | wzxE | SAMN05421784_10614 | SAMN05421784_10928 | YejG-like protein. | Antigen flippase; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family. | 0.606 |
SFU41386.1 | wzyE | SAMN05421784_10614 | SAMN05421784_10930 | YejG-like protein. | Antigen polymerase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family. | 0.719 |
SFU41386.1 | wzzE | SAMN05421784_10614 | SAMN05421784_10921 | YejG-like protein. | Lipopolysaccharide biosynthesis protein WzzE; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family. | 0.774 |
SFU50031.1 | SFU41386.1 | SAMN05421784_10929 | SAMN05421784_10614 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | YejG-like protein. | 0.674 |
SFU50031.1 | SFU60471.1 | SAMN05421784_10929 | SAMN05421784_11454 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | HAMP domain-containing protein. | 0.723 |
SFU50031.1 | SFU86743.1 | SAMN05421784_10929 | SAMN05421784_13611 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | Protein CpxP. | 0.770 |
SFU50031.1 | wecA | SAMN05421784_10929 | SAMN05421784_10920 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55). | 0.565 |
SFU50031.1 | wecB | SAMN05421784_10929 | SAMN05421784_10922 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | UDP-N-Acetylglucosamine 2-epimerase; Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues. | 0.751 |
SFU50031.1 | wecC | SAMN05421784_10929 | SAMN05421784_10923 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily. | 0.788 |
SFU50031.1 | wecD | SAMN05421784_10929 | SAMN05421784_10926 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family. | 0.975 |
SFU50031.1 | wzxE | SAMN05421784_10929 | SAMN05421784_10928 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | Antigen flippase; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family. | 0.954 |
SFU50031.1 | wzyE | SAMN05421784_10929 | SAMN05421784_10930 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | Antigen polymerase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family. | 0.985 |
SFU50031.1 | wzzE | SAMN05421784_10929 | SAMN05421784_10921 | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | Lipopolysaccharide biosynthesis protein WzzE; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family. | 0.876 |
SFU60471.1 | SFU41386.1 | SAMN05421784_11454 | SAMN05421784_10614 | HAMP domain-containing protein. | YejG-like protein. | 0.773 |
SFU60471.1 | SFU50031.1 | SAMN05421784_11454 | SAMN05421784_10929 | HAMP domain-containing protein. | dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase. | 0.723 |
SFU60471.1 | SFU86743.1 | SAMN05421784_11454 | SAMN05421784_13611 | HAMP domain-containing protein. | Protein CpxP. | 0.762 |
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