Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU27080.1 | SFU64929.1 | SAMN05421784_101109 | SAMN05421784_11673 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.400 |
SFU27080.1 | SFU73069.1 | SAMN05421784_101109 | SAMN05421784_12126 | ABC-2 type transport system permease protein. | Nitroreductase. | 0.600 |
SFU27080.1 | SFU78014.1 | SAMN05421784_101109 | SAMN05421784_12512 | ABC-2 type transport system permease protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.525 |
SFU64378.1 | SFU64402.1 | SAMN05421784_11650 | SAMN05421784_11651 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.886 |
SFU64378.1 | SFU64929.1 | SAMN05421784_11650 | SAMN05421784_11673 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.400 |
SFU64378.1 | SFU73069.1 | SAMN05421784_11650 | SAMN05421784_12126 | ABC-2 type transport system permease protein. | Nitroreductase. | 0.587 |
SFU64378.1 | SFU78014.1 | SAMN05421784_11650 | SAMN05421784_12512 | ABC-2 type transport system permease protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.525 |
SFU64402.1 | SFU64378.1 | SAMN05421784_11651 | SAMN05421784_11650 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.886 |
SFU64402.1 | SFU64929.1 | SAMN05421784_11651 | SAMN05421784_11673 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.400 |
SFU64402.1 | SFU73069.1 | SAMN05421784_11651 | SAMN05421784_12126 | ABC-2 type transport system permease protein. | Nitroreductase. | 0.587 |
SFU64402.1 | SFU78014.1 | SAMN05421784_11651 | SAMN05421784_12512 | ABC-2 type transport system permease protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.525 |
SFU64929.1 | SFU27080.1 | SAMN05421784_11673 | SAMN05421784_101109 | Hypothetical protein. | ABC-2 type transport system permease protein. | 0.400 |
SFU64929.1 | SFU64378.1 | SAMN05421784_11673 | SAMN05421784_11650 | Hypothetical protein. | ABC-2 type transport system permease protein. | 0.400 |
SFU64929.1 | SFU64402.1 | SAMN05421784_11673 | SAMN05421784_11651 | Hypothetical protein. | ABC-2 type transport system permease protein. | 0.400 |
SFU64929.1 | SFU73069.1 | SAMN05421784_11673 | SAMN05421784_12126 | Hypothetical protein. | Nitroreductase. | 0.489 |
SFU64929.1 | SFU78014.1 | SAMN05421784_11673 | SAMN05421784_12512 | Hypothetical protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.667 |
SFU64929.1 | acrZ | SAMN05421784_11673 | SAMN05421784_11672 | Hypothetical protein. | Multidrug efflux pump-associated protein AcrZ; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export. | 0.440 |
SFU73069.1 | SFU27080.1 | SAMN05421784_12126 | SAMN05421784_101109 | Nitroreductase. | ABC-2 type transport system permease protein. | 0.600 |
SFU73069.1 | SFU64378.1 | SAMN05421784_12126 | SAMN05421784_11650 | Nitroreductase. | ABC-2 type transport system permease protein. | 0.587 |
SFU73069.1 | SFU64402.1 | SAMN05421784_12126 | SAMN05421784_11651 | Nitroreductase. | ABC-2 type transport system permease protein. | 0.587 |
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