Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU68509.1 | SFU68526.1 | SAMN05421784_11839 | SAMN05421784_11840 | Spermidine export protein MdtI; Catalyzes the excretion of spermidine. | Spermidine export protein MdtJ; Catalyzes the excretion of spermidine. | 0.992 |
SFU68509.1 | SFU69734.1 | SAMN05421784_11839 | SAMN05421784_11936 | Spermidine export protein MdtI; Catalyzes the excretion of spermidine. | Quaternary ammonium compound-resistance protein SugE. | 0.633 |
SFU68526.1 | SFU68509.1 | SAMN05421784_11840 | SAMN05421784_11839 | Spermidine export protein MdtJ; Catalyzes the excretion of spermidine. | Spermidine export protein MdtI; Catalyzes the excretion of spermidine. | 0.992 |
SFU68526.1 | SFU69734.1 | SAMN05421784_11840 | SAMN05421784_11936 | Spermidine export protein MdtJ; Catalyzes the excretion of spermidine. | Quaternary ammonium compound-resistance protein SugE. | 0.605 |
SFU69734.1 | SFU68509.1 | SAMN05421784_11936 | SAMN05421784_11839 | Quaternary ammonium compound-resistance protein SugE. | Spermidine export protein MdtI; Catalyzes the excretion of spermidine. | 0.633 |
SFU69734.1 | SFU68526.1 | SAMN05421784_11936 | SAMN05421784_11840 | Quaternary ammonium compound-resistance protein SugE. | Spermidine export protein MdtJ; Catalyzes the excretion of spermidine. | 0.605 |
SFU69734.1 | efp | SAMN05421784_11936 | SAMN05421784_11935 | Quaternary ammonium compound-resistance protein SugE. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.442 |
efp | SFU69734.1 | SAMN05421784_11935 | SAMN05421784_11936 | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Quaternary ammonium compound-resistance protein SugE. | 0.442 |