Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XDD1_0108 | XDD1_0109 | XDD1_0108 | XDD1_0109 | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Transposase (fragment). | 0.588 |
XDD1_0108 | XDD1_0110 | XDD1_0108 | XDD1_0110 | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Transposase (fragment). | 0.588 |
XDD1_0109 | XDD1_0108 | XDD1_0109 | XDD1_0108 | Transposase (fragment). | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.588 |
XDD1_0109 | XDD1_0110 | XDD1_0109 | XDD1_0110 | Transposase (fragment). | Transposase (fragment). | 0.773 |
XDD1_0109 | doc | XDD1_0109 | XDD1_0111 | Transposase (fragment). | Death on curing protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | 0.439 |
XDD1_0109 | phd | XDD1_0109 | XDD1_0112 | Transposase (fragment). | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.441 |
XDD1_0110 | XDD1_0108 | XDD1_0110 | XDD1_0108 | Transposase (fragment). | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.588 |
XDD1_0110 | XDD1_0109 | XDD1_0110 | XDD1_0109 | Transposase (fragment). | Transposase (fragment). | 0.773 |
XDD1_0110 | doc | XDD1_0110 | XDD1_0111 | Transposase (fragment). | Death on curing protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | 0.439 |
XDD1_0110 | phd | XDD1_0110 | XDD1_0112 | Transposase (fragment). | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.441 |
doc | XDD1_0109 | XDD1_0111 | XDD1_0109 | Death on curing protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | Transposase (fragment). | 0.439 |
doc | XDD1_0110 | XDD1_0111 | XDD1_0110 | Death on curing protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | Transposase (fragment). | 0.439 |
doc | phd | XDD1_0111 | XDD1_0112 | Death on curing protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.793 |
phd | XDD1_0109 | XDD1_0112 | XDD1_0109 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Transposase (fragment). | 0.441 |
phd | XDD1_0110 | XDD1_0112 | XDD1_0110 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Transposase (fragment). | 0.441 |
phd | doc | XDD1_0112 | XDD1_0111 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Death on curing protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | 0.793 |